CDS
| Accession Number | TCMCG057C15062 |
| gbkey | CDS |
| Protein Id | XP_018478270.1 |
| Location | complement(join(1623917..1623997,1624088..1624130,1624227..1624318,1624400..1624488,1624570..1624645,1624736..1624882,1624970..1625074,1625176..1625325,1625426..1625495,1625642..1625717,1625808..1625897,1625981..1626023,1626102..1626296)) |
| Gene | LOC108849231 |
| GeneID | 108849231 |
| Organism | Raphanus sativus |
Protein
| Length | 418aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018622768.1 |
| Definition | PREDICTED: squalene synthase 1-like [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | I |
| Description | squalene |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction |
R00702
[VIEW IN KEGG] R02872 [VIEW IN KEGG] R06223 [VIEW IN KEGG] |
| KEGG_rclass |
RC00362
[VIEW IN KEGG] RC00796 [VIEW IN KEGG] RC02839 [VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko01006 [VIEW IN KEGG] |
| KEGG_ko |
ko:K00801
[VIEW IN KEGG] |
| EC |
2.5.1.21
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00100
[VIEW IN KEGG] ko00909 [VIEW IN KEGG] ko01100 [VIEW IN KEGG] ko01110 [VIEW IN KEGG] ko01130 [VIEW IN KEGG] map00100 [VIEW IN KEGG] map00909 [VIEW IN KEGG] map01100 [VIEW IN KEGG] map01110 [VIEW IN KEGG] map01130 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGGGAGCTTGGGGACGTTTCTGAGATACCCTGATGATATATATCCGCTCTTGAAGATGAAACGAGCGATGGAGAAAGCAGAGAAGCAGATCCCACCTGAGCCTCACTGGGCTTTCTGCTACTCTATGCTCCACAAGGTCTCTCGAAGCTTCTCTCTCGTTATTCAGCAACTTGGCACCCAGCTTCGTAACGCTGTGTGTGTGTTCTACTTGGTTCTTCGAGCTCTTGATACTGTTGAGGATGACACTAGCATACCAACTGATGAAAAGCTGCCCATCCTGATAGCCTTCCACCGCCACATATATGATATTGACTGGCACTATTCATGTGGTACGAAGGAGTACAAGGTTCTAATGGACCAATTTCACTATGTTTCTGCAGCTTTTGTGGAACTTGAAAAAGGGTATCAAGAGGCTATTGAGGAAATAACTAAAAGAATGGGTGCAGGAATGGCCAAGTTTATCTGCCAGGAGGTAGAGACTGTTGATGACTATGATGAGTACTGCCACTATGTTGCTGGACTTGTGGGTTTGGGTCTGTCTAAACTCTTCCTAGCTTCCGGATCAGAAGTTTTGACCCCAGACTGGGAGCATATCTCCAACTCTATGGGTTTATTTCTTCAGAAAACAAACATTATAAGAGATTATCTTGAGGACATTAATGAAATACCAAAGTCCCGCATGTTTTGGCCTCGCAAGATATGGGGCAAATATGCTGCCAAGCTCGAGGACTTAAAGTACGAGAAGAACTCAAATAGTTCAGTGCAGTGCTTGAATGAAATGGTCAGTAATGCTTTGACGCATATCGAAGATTGCCTGAAATTCATGGCTTCGTTGCGTGATCCTTCCATATTTCGGTTCTGTGCTATCCCTCAGATCATGGCCATTGGAACACTTGCATTATGCTATAACAATGTGCAAGTGTTTAGAGGCGTTGTGAAATTGAGGCGAGGTCTTACTGCTAAAGTGATTGATCGCACAAAGACAATGGCTGATGTCTATGGTGCCTTCTATGATTTTTCTTGCATGCTTAAAACAAAGGTTGACAAGAAGGATCCAAATGCTAGTAAGACACTAAAACAACTAGAAGACGTTCAGCAGCTCTGCAGAGACAATGGTGTTCTTCATAAGAGAAAGTCTTATGTTAATGACAAAGGACAATCAAACAATCTTTATATTGTAATGCTTATGATTCTACTGGCTATAGTCTTTGCATATCTCAGAGCAAACGGAGTGGTCAGTGATGATGAGCAGTGA |
| Protein: MGSLGTFLRYPDDIYPLLKMKRAMEKAEKQIPPEPHWAFCYSMLHKVSRSFSLVIQQLGTQLRNAVCVFYLVLRALDTVEDDTSIPTDEKLPILIAFHRHIYDIDWHYSCGTKEYKVLMDQFHYVSAAFVELEKGYQEAIEEITKRMGAGMAKFICQEVETVDDYDEYCHYVAGLVGLGLSKLFLASGSEVLTPDWEHISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRKIWGKYAAKLEDLKYEKNSNSSVQCLNEMVSNALTHIEDCLKFMASLRDPSIFRFCAIPQIMAIGTLALCYNNVQVFRGVVKLRRGLTAKVIDRTKTMADVYGAFYDFSCMLKTKVDKKDPNASKTLKQLEDVQQLCRDNGVLHKRKSYVNDKGQSNNLYIVMLMILLAIVFAYLRANGVVSDDEQ |